J4_7BL6_004

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAUAAAG*CUC*GCUU*AG

Length

17 nucleotides

Bulged bases

7BL6|1|A|G|1271, 7BL6|1|A|A|1272, 7BL6|1|A|U|1273, 7BL6|1|A|A|1275, 7BL6|1|A|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7BL6|1|A|C|1270
7BL6|1|A|G|1271
7BL6|1|A|A|1272
7BL6|1|A|U|1273
7BL6|1|A|A|1274
7BL6|1|A|A|1275
7BL6|1|A|A|1276
7BL6|1|A|G|1277
*
7BL6|1|A|C|1293
7BL6|1|A|U|1294
7BL6|1|A|C|1295
*
7BL6|1|A|G|1645
7BL6|1|A|C|1646
7BL6|1|A|U|1647
7BL6|1|A|U|1648
*
7BL6|1|A|A|2009
7BL6|1|A|G|2010

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain N

50S ribosomal protein L17

Chain S

50S ribosomal protein L22