J4_7D80_002
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CAAGGUUAAC*GGGAGCCGAAG*CGAG*CGUUAAG
- Length
- 32 nucleotides
- Bulged bases
- 7D80|1|A|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|C|601
7D80|1|A|A|602
7D80|1|A|A|603
7D80|1|A|G|604
7D80|1|A|G|605
7D80|1|A|U|606
7D80|1|A|U|607
7D80|1|A|A|608
7D80|1|A|A|609
7D80|1|A|C|610
*
7D80|1|A|G|618
7D80|1|A|G|619
7D80|1|A|G|620
7D80|1|A|A|621
7D80|1|A|G|622
7D80|1|A|C|623
7D80|1|A|C|624
7D80|1|A|G|625
7D80|1|A|A|626
7D80|1|A|A|627
7D80|1|A|G|628
*
7D80|1|A|C|635
7D80|1|A|G|636
7D80|1|A|A|637
7D80|1|A|G|638
*
7D80|1|A|C|650
7D80|1|A|G|651
7D80|1|A|U|652
7D80|1|A|U|653
7D80|1|A|A|654
7D80|1|A|A|655
7D80|1|A|G|656
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain d
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
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