J4_7D80_011
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GAGUAAUGUC*GAUG*CUAGCU*AGCC
- Length
- 24 nucleotides
- Bulged bases
- 7D80|1|B|U|121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|B|G|115
7D80|1|B|A|116
7D80|1|B|G|117
7D80|1|B|U|118
7D80|1|B|A|119
7D80|1|B|A|120
7D80|1|B|U|121
7D80|1|B|G|122
7D80|1|B|U|123
7D80|1|B|C|124
*
7D80|1|B|G|237
7D80|1|B|A|238
7D80|1|B|U|239
7D80|1|B|G|240
*
7D80|1|B|C|286
7D80|1|B|U|287
7D80|1|B|A|288
7D80|1|B|G|289
7D80|1|B|C|290
7D80|1|B|U|291
*
7D80|1|B|A|309
7D80|1|B|G|310
7D80|1|B|C|311
7D80|1|B|C|312
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain Q
- 30S ribosomal protein S16
- Chain R
- 30S ribosomal protein S17
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