J4_7D80_017
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GCAAAAUGG*CG*UCGAAGAUACCAGCUGGC*GCCAGGC
- Length
- 36 nucleotides
- Bulged bases
- 7D80|1|A|G|1763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|1674
7D80|1|A|C|1675
7D80|1|A|A|1676
7D80|1|A|A|1677
7D80|1|A|A|1678
7D80|1|A|A|1679
7D80|1|A|U|1680
7D80|1|A|G|1681
7D80|1|A|G|1682
*
7D80|1|A|C|1706
7D80|1|A|G|1707
*
7D80|1|A|U|1751
7D80|1|A|C|1752
7D80|1|A|G|1753
7D80|1|A|A|1754
7D80|1|A|A|1755
7D80|1|A|G|1756
7D80|1|A|A|1757
7D80|1|A|U|1758
7D80|1|A|A|1759
7D80|1|A|C|1760
7D80|1|A|C|1761
7D80|1|A|A|1762
7D80|1|A|G|1763
7D80|1|A|C|1764
7D80|1|A|U|1765
7D80|1|A|G|1766
7D80|1|A|G|1767
7D80|1|A|C|1768
*
7D80|1|A|G|1984
7D80|1|A|C|1985
7D80|1|A|C|1986
7D80|1|A|A|1987
7D80|1|A|G|1988
7D80|1|A|G|1989
7D80|1|A|C|1990
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- Small subunit ribosomal RNA; SSU rRNA
- Chain c
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L14
- Chain o
- 50S ribosomal protein L19
Coloring options: