J4_7D80_021
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GGGGGCUG*UGGAC*GAAGAGAUAAG*CGAAACUUGCCC
- Length
- 36 nucleotides
- Bulged bases
- 7D80|1|A|A|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|A|G|2641
7D80|1|A|G|2642
7D80|1|A|G|2643
7D80|1|A|G|2644
7D80|1|A|G|2645
7D80|1|A|C|2646
7D80|1|A|U|2647
7D80|1|A|G|2648
*
7D80|1|A|U|2672
7D80|1|A|G|2673
7D80|1|A|G|2674
7D80|1|A|A|2675
7D80|1|A|C|2676
*
7D80|1|A|G|2732
7D80|1|A|A|2733
7D80|1|A|A|2734
7D80|1|A|G|2735
7D80|1|A|A|2736
7D80|1|A|G|2737
7D80|1|A|A|2738
7D80|1|A|U|2739
7D80|1|A|A|2740
7D80|1|A|A|2741
7D80|1|A|G|2742
*
7D80|1|A|C|2762
7D80|1|A|G|2763
7D80|1|A|A|2764
7D80|1|A|A|2765
7D80|1|A|A|2766
7D80|1|A|C|2767
7D80|1|A|U|2768
7D80|1|A|U|2769
7D80|1|A|G|2770
7D80|1|A|C|2771
7D80|1|A|C|2772
7D80|1|A|C|2773
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain c
- 50S ribosomal protein L3
- Chain f
- 50S ribosomal protein L6
- Chain i
- 50S ribosomal protein L13
- Chain j
- 50S ribosomal protein L14
Coloring options: