J4_7D80_024
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UGGA*UACAAUGGCGCAUACAAAG*CAUAAAGUGCGUCGUAGUCCGGAUUG*CAUGAAGUCGGAA
- Length
- 62 nucleotides
- Bulged bases
- 7D80|1|B|U|1240, 7D80|1|B|U|1286, 7D80|1|B|C|1302, 7D80|1|B|C|1336
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7D80|1|B|U|943
7D80|1|B|G|944
7D80|1|B|G|945
7D80|1|B|A|946
*
7D80|1|B|U|1235
7D80|1|B|A|1236
7D80|1|B|C|1237
7D80|1|B|A|1238
7D80|1|B|A|1239
7D80|1|B|U|1240
7D80|1|B|G|1241
7D80|1|B|G|1242
7D80|1|B|C|1243
7D80|1|B|G|1244
7D80|1|B|C|1245
7D80|1|B|A|1246
7D80|1|B|U|1247
7D80|1|B|A|1248
7D80|1|B|C|1249
7D80|1|B|A|1250
7D80|1|B|A|1251
7D80|1|B|A|1252
7D80|1|B|G|1253
*
7D80|1|B|C|1284
7D80|1|B|A|1285
7D80|1|B|U|1286
7D80|1|B|A|1287
7D80|1|B|A|1288
7D80|1|B|A|1289
7D80|1|B|G|1290
7D80|1|B|U|1291
7D80|1|B|G|1292
7D80|1|B|C|1293
7D80|1|B|G|1294
7D80|1|B|U|1295
7D80|1|B|C|1296
7D80|1|B|G|1297
7D80|1|B|U|1298
7D80|1|B|A|1299
7D80|1|B|G|1300
7D80|1|B|U|1301
7D80|1|B|C|1302
7D80|1|B|C|1303
7D80|1|B|G|1304
7D80|1|B|G|1305
7D80|1|B|A|1306
7D80|1|B|U|1307
7D80|1|B|U|1308
7D80|1|B|G|1309
*
7D80|1|B|C|1328
7D80|1|B|A|1329
7D80|1|B|U|1330
7D80|1|B|G|1331
7D80|1|B|A|1332
7D80|1|B|A|1333
7D80|1|B|G|1334
7D80|1|B|U|1335
7D80|1|B|C|1336
7D80|1|B|G|1337
7D80|1|B|G|1338
7D80|1|B|A|1339
7D80|1|B|A|1340
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S7
- Chain J
- 30S ribosomal protein S9
- Chain K
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S13
- Chain T
- 30S ribosomal protein S19
- Chain X
- Transfer RNA; tRNA
- Chain y
- Transfer RNA; tRNA
Coloring options: