J4_7F0D_004

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

7F0D|1|A|G|1472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|G|1441
7F0D|1|A|G|1442
7F0D|1|A|U|1443
7F0D|1|A|U|1444
7F0D|1|A|C|1445
*
7F0D|1|A|G|1469
7F0D|1|A|G|1470
7F0D|1|A|U|1471
7F0D|1|A|G|1472
7F0D|1|A|A|1473
7F0D|1|A|G|1474
*
7F0D|1|A|C|1535
7F0D|1|A|C|1536
*
7F0D|1|A|G|1832
7F0D|1|A|C|1833
7F0D|1|A|C|1834
7F0D|1|A|C|1835
7F0D|1|A|G|1836
7F0D|1|A|U|1837
7F0D|1|A|A|1838
7F0D|1|A|C|1839

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23