J4_7F0D_005

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUAC*GGGC*GCAUAG*CGAAUUC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|G|1681
7F0D|1|A|U|1682
7F0D|1|A|A|1683
7F0D|1|A|C|1684
*
7F0D|1|A|G|1703
7F0D|1|A|G|1704
7F0D|1|A|G|1705
7F0D|1|A|C|1706
*
7F0D|1|A|G|1763
7F0D|1|A|C|1764
7F0D|1|A|A|1765
7F0D|1|A|U|1766
7F0D|1|A|A|1767
7F0D|1|A|G|1768
*
7F0D|1|A|C|1779
7F0D|1|A|G|1780
7F0D|1|A|A|1781
7F0D|1|A|A|1782
7F0D|1|A|U|1783
7F0D|1|A|U|1784
7F0D|1|A|C|1785

Current chains

Chain A

23S rRNA

Nearby chains