J4_7F0D_006

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGACUG*CACAG*UGAC*GUAACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|C|2005
7F0D|1|A|G|2006
7F0D|1|A|A|2007
7F0D|1|A|C|2008
7F0D|1|A|U|2009
7F0D|1|A|G|2010
*
7F0D|1|A|C|2022
7F0D|1|A|A|2023
7F0D|1|A|C|2024
7F0D|1|A|A|2025
7F0D|1|A|G|2026
*
7F0D|1|A|U|2061
7F0D|1|A|G|2062
7F0D|1|A|A|2063
7F0D|1|A|C|2064
*
7F0D|1|A|G|2213
7F0D|1|A|U|2214
7F0D|1|A|A|2215
7F0D|1|A|A|2216
7F0D|1|A|C|2217
7F0D|1|A|G|2218

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2