J4_7F0D_009

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AAACC*GAC*GGUCA*UUCU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7F0D|1|A|A|2880
7F0D|1|A|A|2881
7F0D|1|A|A|2882
7F0D|1|A|C|2883
7F0D|1|A|C|2884
*
7F0D|1|A|G|2912
7F0D|1|A|A|2913
7F0D|1|A|C|2914
*
7F0D|1|A|G|2969
7F0D|1|A|G|2970
7F0D|1|A|U|2971
7F0D|1|A|C|2972
7F0D|1|A|A|2973
*
7F0D|1|A|U|3007
7F0D|1|A|U|3008
7F0D|1|A|C|3009
7F0D|1|A|U|3010

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14