J4_7K00_011
3D structure
- PDB id
- 7K00 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Bacterial Ribosome at 2 Angstrom Resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.98 Å
Loop
- Sequence
- UC*GGUGAG*CU*AAUCGUA
- Length
- 17 nucleotides
- Bulged bases
- 7K00|1|a|G|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7K00_011 not in the Motif Atlas
- Homologous match to J4_5J7L_023
- Geometric discrepancy: 0.0456
- The information below is about J4_5J7L_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_10313.5
- Basepair signature
- cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7K00|1|a|U|1313
7K00|1|a|C|1314
*
7K00|1|a|G|1338
7K00|1|a|G|1339
7K00|1|a|U|1340
7K00|1|a|G|1341
7K00|1|a|A|1342
7K00|1|a|G|1343
*
7K00|1|a|C|1404
7K00|1|a|U|1405
*
7K00|1|a|A|1597
7K00|1|a|A|1598
7K00|1|a|U|1599
7K00|1|a|C|1600
7K00|1|a|G|1601
7K00|1|a|U|1602
7K00|1|a|A|1603
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain s
- 50S ribosomal protein L23
Coloring options: