J4_7K50_002

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

7K50|1|1|U|653, 7K50|1|1|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7K50|1|1|C|601
7K50|1|1|A|602
7K50|1|1|A|603
7K50|1|1|G|604
*
7K50|1|1|C|624
7K50|1|1|G|625
7K50|1|1|A|626
7K50|1|1|A|627
7K50|1|1|G|628
*
7K50|1|1|C|635
7K50|1|1|G|636
7K50|1|1|A|637
7K50|1|1|G|638
*
7K50|1|1|C|650
7K50|1|1|G|651
7K50|1|1|U|652
7K50|1|1|U|653
7K50|1|1|A|654
7K50|1|1|A|655
7K50|1|1|G|656

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L35

Chain d

50S ribosomal protein L4

Chain l

50S ribosomal protein L15