J4_7KWG_001

3D structure

PDB id

7KWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

GAGUAACAC*GCU*AUAG*CC

Length

18 nucleotides

Bulged bases

7KWG|1|a|C|120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7KWG|1|a|G|114
7KWG|1|a|A|115
7KWG|1|a|G|116
7KWG|1|a|U|117
7KWG|1|a|A|118
7KWG|1|a|A|119
7KWG|1|a|C|120
7KWG|1|a|A|121
7KWG|1|a|C|122
*
7KWG|1|a|G|246
7KWG|1|a|C|247
7KWG|1|a|U|248
*
7KWG|1|a|A|294
7KWG|1|a|U|295
7KWG|1|a|A|296
7KWG|1|a|G|297
*
7KWG|1|a|C|319
7KWG|1|a|C|320

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17