J4_7LS2_018

3D structure

PDB id

7LS2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAAGGC*GCUUG*CC*GGG

Length

17 nucleotides

Bulged bases

7LS2|1|A2|A|3886

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS2|1|A2|C|3883
7LS2|1|A2|U|3884
7LS2|1|A2|A|3885
7LS2|1|A2|A|3886
7LS2|1|A2|G|3887
7LS2|1|A2|G|3888
7LS2|1|A2|C|3889
*
7LS2|1|A2|G|3939
7LS2|1|A2|C|3940
7LS2|1|A2|U|3941
7LS2|1|A2|U|3942
7LS2|1|A2|G|3943
*
7LS2|1|A2|C|3970
7LS2|1|A2|C|3971
*
7LS2|1|A2|G|3980
7LS2|1|A2|G|3981
7LS2|1|A2|G|3982

Current chains

Chain A2

28S rRNA

Nearby chains

Chain G2

60S ribosomal protein L5

Chain N2

60S ribosomal protein L21

Chain i2

60S ribosomal protein L36a