J4_7M4Y_001
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- CC*GAGUAG*UGAAUAUG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 7M4Y|1|A|U|404
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7M4Y_001 not in the Motif Atlas
- Homologous match to J4_5J7L_018
- Geometric discrepancy: 0.1202
- The information below is about J4_5J7L_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7M4Y|1|A|C|275
7M4Y|1|A|C|276
*
7M4Y|1|A|G|369
7M4Y|1|A|A|370
7M4Y|1|A|G|371
7M4Y|1|A|U|372
7M4Y|1|A|A|373
7M4Y|1|A|G|374
*
7M4Y|1|A|U|398
7M4Y|1|A|G|399
7M4Y|1|A|A|400
7M4Y|1|A|A|401
7M4Y|1|A|U|402
7M4Y|1|A|A|403
7M4Y|1|A|U|404
7M4Y|1|A|G|405
*
7M4Y|1|A|C|420
7M4Y|1|A|A|421
7M4Y|1|A|A|422
7M4Y|1|A|G|423
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L9
- Chain W
- 50S ribosomal protein L28
Coloring options: