J4_7MSM_010

3D structure

PDB id

7MSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Trans_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MSM|1|a|G|110
7MSM|1|a|A|111
7MSM|1|a|G|112
7MSM|1|a|U|113
7MSM|1|a|A|114
7MSM|1|a|A|115
7MSM|1|a|C|116
7MSM|1|a|A|117
7MSM|1|a|C|118
*
7MSM|1|a|G|237
7MSM|1|a|G|238
7MSM|1|a|C|239
*
7MSM|1|a|G|285
7MSM|1|a|U|286
7MSM|1|a|A|287
7MSM|1|a|G|288
*
7MSM|1|a|C|310
7MSM|1|a|C|311

Current chains

Chain a

16S rRNA

Nearby chains

Chain l

30S ribosomal protein S12

Chain p

30S ribosomal protein S16

Chain q

30S ribosomal protein S17