J4_7MSZ_003
3D structure
- PDB id
- 7MSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mtb 70SIC in complex with MtbEttA at Trans_R1 state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACAAG*CC*GUAC*GG
- Length
- 15 nucleotides
- Bulged bases
- 7MSZ|1|A|G|1402, 7MSZ|1|A|A|1403, 7MSZ|1|A|C|1404, 7MSZ|1|A|A|1405, 7MSZ|1|A|A|1406, 7MSZ|1|A|U|1881, 7MSZ|1|A|A|1882
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7MSZ_003 not in the Motif Atlas
- Homologous match to J4_7A0S_004
- Geometric discrepancy: 0.4145
- The information below is about J4_7A0S_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_64571.6
- Basepair signature
- cWW-F-cWW-tSS-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7MSZ|1|A|C|1401
7MSZ|1|A|G|1402
7MSZ|1|A|A|1403
7MSZ|1|A|C|1404
7MSZ|1|A|A|1405
7MSZ|1|A|A|1406
7MSZ|1|A|G|1407
*
7MSZ|1|A|C|1425
7MSZ|1|A|C|1426
*
7MSZ|1|A|G|1880
7MSZ|1|A|U|1881
7MSZ|1|A|A|1882
7MSZ|1|A|C|1883
*
7MSZ|1|A|G|2247
7MSZ|1|A|G|2248
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain N
- 50S ribosomal protein L17
- Chain S
- 50S ribosomal protein L22
Coloring options: