J4_7N2C_012
3D structure
- PDB id
- 7N2C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- CU(2MG)*CG*CCUAAGGUAG*CGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 7N2C|1|23|U|1971
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7N2C_012 not in the Motif Atlas
- Homologous match to J4_9DFE_008
- Geometric discrepancy: 0.134
- The information below is about J4_9DFE_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_93343.1
- Basepair signature
- cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tWW-F-cSH-F-F
- Number of instances in this motif group
- 4
Unit IDs
7N2C|1|23|C|1833
7N2C|1|23|U|1834
7N2C|1|23|2MG|1835
*
7N2C|1|23|C|1905
7N2C|1|23|G|1906
*
7N2C|1|23|C|1924
7N2C|1|23|C|1925
7N2C|1|23|U|1926
7N2C|1|23|A|1927
7N2C|1|23|A|1928
7N2C|1|23|G|1929
7N2C|1|23|G|1930
7N2C|1|23|U|1931
7N2C|1|23|A|1932
7N2C|1|23|G|1933
*
7N2C|1|23|C|1967
7N2C|1|23|G|1968
7N2C|1|23|A|1969
7N2C|1|23|A|1970
7N2C|1|23|U|1971
7N2C|1|23|G|1972
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain 16
- Small subunit ribosomal RNA; SSU rRNA
- Chain LB
- 50S ribosomal protein L2
- Chain Pt
- Transfer RNA; tRNA
Coloring options: