J4_7N2U_004
3D structure
- PDB id
- 7N2U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- CC*GAGUAG*UGAAUAUG*CAAG
- Length
- 20 nucleotides
- Bulged bases
- 7N2U|1|23|U|405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7N2U_004 not in the Motif Atlas
- Homologous match to J4_5J7L_018
- Geometric discrepancy: 0.125
- The information below is about J4_5J7L_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_45801.6
- Basepair signature
- cWW-cWW-cSS-F-tHH-cWW-cSH-tWH-F-tHS-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
7N2U|1|23|C|268
7N2U|1|23|C|269
*
7N2U|1|23|G|370
7N2U|1|23|A|371
7N2U|1|23|G|372
7N2U|1|23|U|373
7N2U|1|23|A|374
7N2U|1|23|G|375
*
7N2U|1|23|U|399
7N2U|1|23|G|400
7N2U|1|23|A|401
7N2U|1|23|A|402
7N2U|1|23|U|403
7N2U|1|23|A|404
7N2U|1|23|U|405
7N2U|1|23|G|406
*
7N2U|1|23|C|421
7N2U|1|23|A|422
7N2U|1|23|A|423
7N2U|1|23|G|424
Current chains
- Chain 23
- 23S rRNA
Nearby chains
- Chain LI
- 50S ribosomal protein L9
- Chain Lb
- 50S ribosomal protein L28
Coloring options: