J4_7N2U_009

3D structure

PDB id

7N2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

UC*GGUGAG*CU*AAUCGUA

Length

17 nucleotides

Bulged bases

7N2U|1|23|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7N2U_009 not in the Motif Atlas

Homologous match to J4_5J7L_023

Geometric discrepancy: 0.0493

The information below is about J4_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_10313.5

Basepair signature

cWW-cWW-tHW-F-F-F-F-F-F-cWW-cWW

Number of instances in this motif group

5

Unit IDs

7N2U|1|23|U|1313
7N2U|1|23|C|1314
*
7N2U|1|23|G|1338
7N2U|1|23|G|1339
7N2U|1|23|U|1340
7N2U|1|23|G|1341
7N2U|1|23|A|1342
7N2U|1|23|G|1343
*
7N2U|1|23|C|1404
7N2U|1|23|U|1405
*
7N2U|1|23|A|1597
7N2U|1|23|A|1598
7N2U|1|23|U|1599
7N2U|1|23|C|1600
7N2U|1|23|G|1601
7N2U|1|23|U|1602
7N2U|1|23|A|1603

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LW

50S ribosomal protein L23