J4_7NAT_002

3D structure

PDB id

7NAT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

7NAT|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7NAT_002 not in the Motif Atlas

Homologous match to J4_5J7L_002

Geometric discrepancy: 0.1418

The information below is about J4_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7NAT|1|A|G|142
7NAT|1|A|A|143
7NAT|1|A|G|144
*
7NAT|1|A|C|178
7NAT|1|A|A|179
7NAT|1|A|U|180
7NAT|1|A|A|181
7NAT|1|A|A|182
7NAT|1|A|C|183
7NAT|1|A|G|184
*
7NAT|1|A|C|193
7NAT|1|A|C|194
7NAT|1|A|A|195
7NAT|1|A|A|196
7NAT|1|A|A|197
7NAT|1|A|G|198
*
7NAT|1|A|U|219
7NAT|1|A|G|220
7NAT|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20