J4_7NAU_002

3D structure

PDB id

7NAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.78 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

7NAU|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7NAU_002 not in the Motif Atlas

Homologous match to J4_5J7L_002

Geometric discrepancy: 0.1205

The information below is about J4_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7NAU|1|A|G|142
7NAU|1|A|A|143
7NAU|1|A|G|144
*
7NAU|1|A|C|178
7NAU|1|A|A|179
7NAU|1|A|U|180
7NAU|1|A|A|181
7NAU|1|A|A|182
7NAU|1|A|C|183
7NAU|1|A|G|184
*
7NAU|1|A|C|193
7NAU|1|A|C|194
7NAU|1|A|A|195
7NAU|1|A|A|196
7NAU|1|A|A|197
7NAU|1|A|G|198
*
7NAU|1|A|U|219
7NAU|1|A|G|220
7NAU|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20