J4_7NAX_002

3D structure

PDB id

7NAX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

7NAX|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J4_7NAX_002 not in the Motif Atlas

Homologous match to J4_5J7L_002

Geometric discrepancy: 0.1435

The information below is about J4_5J7L_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J4_01665.1

Basepair signature

cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7NAX|1|A|G|142
7NAX|1|A|A|143
7NAX|1|A|G|144
*
7NAX|1|A|C|178
7NAX|1|A|A|179
7NAX|1|A|U|180
7NAX|1|A|A|181
7NAX|1|A|A|182
7NAX|1|A|C|183
7NAX|1|A|G|184
*
7NAX|1|A|C|193
7NAX|1|A|C|194
7NAX|1|A|A|195
7NAX|1|A|A|196
7NAX|1|A|A|197
7NAX|1|A|G|198
*
7NAX|1|A|U|219
7NAX|1|A|G|220
7NAX|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20