J4_7NHK_011
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAGC*GAC*GGAAG*CAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7NHK_011 not in the Motif Atlas
- Homologous match to J4_9DFE_010
- Geometric discrepancy: 0.2124
- The information below is about J4_9DFE_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_77044.5
- Basepair signature
- cWW-F-tHS-F-cWW-cWW-cWW-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
7NHK|1|A|G|2656
7NHK|1|A|A|2657
7NHK|1|A|G|2658
7NHK|1|A|C|2659
*
7NHK|1|A|G|2687
7NHK|1|A|A|2688
7NHK|1|A|C|2689
*
7NHK|1|A|G|2744
7NHK|1|A|G|2745
7NHK|1|A|A|2746
7NHK|1|A|A|2747
7NHK|1|A|G|2748
*
7NHK|1|A|C|2782
7NHK|1|A|A|2783
7NHK|1|A|C|2784
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain H
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L13
- Chain N
- 50S ribosomal protein L14
Coloring options: