J4_7NWG_002
3D structure
- PDB id
- 7NWG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CC*GAC*GUGG*CCACAGCCAAGGGAACG
- Length
- 26 nucleotides
- Bulged bases
- 7NWG|1|51|A|3876, 7NWG|1|51|A|3877, 7NWG|1|51|C|3878
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7NWG|1|51|C|1313
7NWG|1|51|C|1314
*
7NWG|1|51|G|1329
7NWG|1|51|A|1330
7NWG|1|51|C|1331
*
7NWG|1|51|G|2355
7NWG|1|51|U|2356
7NWG|1|51|G|2357
7NWG|1|51|G|2358
*
7NWG|1|51|C|3863
7NWG|1|51|C|3864
7NWG|1|51|A|3865
7NWG|1|51|C|3866
7NWG|1|51|A|3867
7NWG|1|51|G|3868
7NWG|1|51|C|3869
7NWG|1|51|C|3870
7NWG|1|51|A|3871
7NWG|1|51|A|3872
7NWG|1|51|G|3873
7NWG|1|51|G|3874
7NWG|1|51|G|3875
7NWG|1|51|A|3876
7NWG|1|51|A|3877
7NWG|1|51|C|3878
7NWG|1|51|G|3879
Current chains
- Chain 51
- 28S Ribosomal RNA
Nearby chains
- Chain 1
- Sec61Beta
- Chain 81
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain B3
- uL3
- Chain C3
- uL4
- Chain O3
- 60S RIBOSOMAL PROTEIN UL13
- Chain P3
- uL22
- Chain e3
- eL32
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