J4_7NWG_016

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GG*UGUGAA*UGGAAAGCGUC*GGCGUC

Length

25 nucleotides

Bulged bases

7NWG|1|51|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|51|G|2618
7NWG|1|51|G|2619
*
7NWG|1|51|U|2637
7NWG|1|51|G|2638
7NWG|1|51|U|2639
7NWG|1|51|G|2640
7NWG|1|51|A|2641
7NWG|1|51|A|2642
*
7NWG|1|51|U|2692
7NWG|1|51|G|2693
7NWG|1|51|G|2694
7NWG|1|51|A|2695
7NWG|1|51|A|2696
7NWG|1|51|A|2697
7NWG|1|51|G|2698
7NWG|1|51|C|2699
7NWG|1|51|G|2700
7NWG|1|51|U|2701
7NWG|1|51|C|2702
*
7NWG|1|51|G|2714
7NWG|1|51|G|2715
7NWG|1|51|C|2716
7NWG|1|51|G|2717
7NWG|1|51|U|2718
7NWG|1|51|C|2719

Current chains

Chain 51

28S Ribosomal RNA

Nearby chains

Chain R3

60S ribosomal protein L19

Chain U3

L22

Chain g3

60S ribosomal protein L34

Chain k3

L38