J4_7O1A_002
3D structure
- PDB id
- 7O1A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAG*CAUAACG*CCAAAG*UGC
- Length
- 19 nucleotides
- Bulged bases
- 7O1A|1|AA|C|183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7O1A_002 not in the Motif Atlas
- Homologous match to J4_5J7L_002
- Geometric discrepancy: 0.1031
- The information below is about J4_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_01665.1
- Basepair signature
- cWW-tWH-F-tWH-cWW-tSS-F-tHW-tSS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
7O1A|1|AA|G|142
7O1A|1|AA|A|143
7O1A|1|AA|G|144
*
7O1A|1|AA|C|178
7O1A|1|AA|A|179
7O1A|1|AA|U|180
7O1A|1|AA|A|181
7O1A|1|AA|A|182
7O1A|1|AA|C|183
7O1A|1|AA|G|184
*
7O1A|1|AA|C|193
7O1A|1|AA|C|194
7O1A|1|AA|A|195
7O1A|1|AA|A|196
7O1A|1|AA|A|197
7O1A|1|AA|G|198
*
7O1A|1|AA|U|219
7O1A|1|AA|G|220
7O1A|1|AA|C|221
Current chains
- Chain AA
- Ribosomal RNA 16S
Nearby chains
- Chain AT
- 30S ribosomal protein S20
Coloring options: