J4_7OBR_001

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

7OBR|1|5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OBR|1|5|C|111
7OBR|1|5|C|112
*
7OBR|1|5|G|278
7OBR|1|5|A|279
7OBR|1|5|G|280
7OBR|1|5|U|281
7OBR|1|5|C|282
7OBR|1|5|G|283
*
7OBR|1|5|C|304
7OBR|1|5|A|305
7OBR|1|5|A|306
7OBR|1|5|A|307
7OBR|1|5|G|308
7OBR|1|5|C|309
7OBR|1|5|G|310
*
7OBR|1|5|U|327
7OBR|1|5|A|328
7OBR|1|5|A|329
7OBR|1|5|G|330

Current chains

Chain 5

28S rRNA

Nearby chains

Chain L

60S ribosomal protein L13

Chain N

Ribosomal protein L15

Chain h

uL29

Chain i

60S ribosomal protein L36