J4_7OBR_008

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUG*CGG*UCUUAAGGUAG*UGAAUG

Length

23 nucleotides

Bulged bases

7OBR|1|5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OBR|1|5|C|3696
7OBR|1|5|U|3697
7OBR|1|5|G|3698
*
7OBR|1|5|C|3752
7OBR|1|5|G|3753
7OBR|1|5|G|3754
*
7OBR|1|5|U|3770
7OBR|1|5|C|3771
7OBR|1|5|U|3772
7OBR|1|5|U|3773
7OBR|1|5|A|3774
7OBR|1|5|A|3775
7OBR|1|5|G|3776
7OBR|1|5|G|3777
7OBR|1|5|U|3778
7OBR|1|5|A|3779
7OBR|1|5|G|3780
*
7OBR|1|5|U|3814
7OBR|1|5|G|3815
7OBR|1|5|A|3816
7OBR|1|5|A|3817
7OBR|1|5|U|3818
7OBR|1|5|G|3819

Current chains

Chain 5

28S rRNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain n

60s ribosomal protein l41