J4_7OHU_003
3D structure
- PDB id
- 7OHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CGAG*CGUAAUGAAAGUGAACGUAG*CGAC*GUAAGAG
- Length
- 35 nucleotides
- Bulged bases
- 7OHU|1|1|U|707, 7OHU|1|1|A|709, 7OHU|1|1|A|710, 7OHU|1|1|U|719, 7OHU|1|1|A|784, 7OHU|1|1|G|785
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OHU|1|1|C|675
7OHU|1|1|G|676
7OHU|1|1|A|677
7OHU|1|1|G|678
*
7OHU|1|1|C|702
7OHU|1|1|G|703
7OHU|1|1|U|704
7OHU|1|1|A|705
7OHU|1|1|A|706
7OHU|1|1|U|707
7OHU|1|1|G|708
7OHU|1|1|A|709
7OHU|1|1|A|710
7OHU|1|1|A|711
7OHU|1|1|G|712
7OHU|1|1|U|713
7OHU|1|1|G|714
7OHU|1|1|A|715
7OHU|1|1|A|716
7OHU|1|1|C|717
7OHU|1|1|G|718
7OHU|1|1|U|719
7OHU|1|1|A|720
7OHU|1|1|G|721
*
7OHU|1|1|C|749
7OHU|1|1|G|750
7OHU|1|1|A|751
7OHU|1|1|C|752
*
7OHU|1|1|G|781
7OHU|1|1|U|782
7OHU|1|1|A|783
7OHU|1|1|A|784
7OHU|1|1|G|785
7OHU|1|1|A|786
7OHU|1|1|G|787
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain L
- 60S ribosomal protein L13-A
- Chain Q
- 60S ribosomal protein L18-A
Coloring options: