J4_7OHX_003

3D structure

PDB id

7OHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAAUU*AUUC*GCU*AUG

Length

15 nucleotides

Bulged bases

7OHX|1|1|A|3011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OHX|1|1|U|3010
7OHX|1|1|A|3011
7OHX|1|1|A|3012
7OHX|1|1|U|3013
7OHX|1|1|U|3014
*
7OHX|1|1|A|3040
7OHX|1|1|U|3041
7OHX|1|1|U|3042
7OHX|1|1|C|3043
*
7OHX|1|1|G|3098
7OHX|1|1|C|3099
7OHX|1|1|U|3100
*
7OHX|1|1|A|3134
7OHX|1|1|U|3135
7OHX|1|1|G|3136

Current chains

Chain 1

25S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain O

60S ribosomal protein L16-A