J4_7OI6_002
3D structure
- PDB id
- 7OI6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- UAAGCCUGCG*CAAUUAAC*GUCAACC*GCA
- Length
- 28 nucleotides
- Bulged bases
- 7OI6|1|A|C|674, 7OI6|1|A|U|702, 7OI6|1|A|A|704, 7OI6|1|A|A|755
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7OI6|1|A|U|666
7OI6|1|A|A|667
7OI6|1|A|A|668
7OI6|1|A|G|669
7OI6|1|A|C|670
7OI6|1|A|C|671
7OI6|1|A|U|672
7OI6|1|A|G|673
7OI6|1|A|C|674
7OI6|1|A|G|675
*
7OI6|1|A|C|698
7OI6|1|A|A|699
7OI6|1|A|A|700
7OI6|1|A|U|701
7OI6|1|A|U|702
7OI6|1|A|A|703
7OI6|1|A|A|704
7OI6|1|A|C|705
*
7OI6|1|A|G|751
7OI6|1|A|U|752
7OI6|1|A|C|753
7OI6|1|A|A|754
7OI6|1|A|A|755
7OI6|1|A|C|756
7OI6|1|A|C|757
*
7OI6|1|A|G|766
7OI6|1|A|C|767
7OI6|1|A|A|768
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 39S ribosomal protein L34, mitochondrial
- Chain 9
- 39S ribosomal protein L41, mitochondrial
- Chain U
- 39S ribosomal protein L23, mitochondrial
- Chain Y
- 39S ribosomal protein L47, mitochondrial
- Chain d
- 39S ribosomal protein L45, mitochondrial
- Chain s
- 39S ribosomal protein S30, mitochondrial
Coloring options: