J4_7OIC_003

3D structure

PDB id

7OIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCCUG*CAUCAC*GCACCG*CUCCAC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OIC|1|A|G|822
7OIC|1|A|C|823
7OIC|1|A|C|824
7OIC|1|A|U|825
7OIC|1|A|G|826
*
7OIC|1|A|C|838
7OIC|1|A|A|839
7OIC|1|A|U|840
7OIC|1|A|C|841
7OIC|1|A|A|842
7OIC|1|A|C|843
*
7OIC|1|A|G|867
7OIC|1|A|C|868
7OIC|1|A|A|869
7OIC|1|A|C|870
7OIC|1|A|C|871
7OIC|1|A|G|872
*
7OIC|1|A|C|967
7OIC|1|A|U|968
7OIC|1|A|C|969
7OIC|1|A|C|970
7OIC|1|A|A|971
7OIC|1|A|C|972

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

39S ribosomal protein L2, mitochondrial