J4_7OOD_002

3D structure

PDB id

7OOD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycoplasma pneumoniae 50S subunit of ribosomes in chloramphenicol-treated cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUUAG*CUGUAG*CGAG*CGUUUG

Length

22 nucleotides

Bulged bases

7OOD|1|3|U|637

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OOD|1|3|C|634
7OOD|1|3|G|635
7OOD|1|3|U|636
7OOD|1|3|U|637
7OOD|1|3|A|638
7OOD|1|3|G|639
*
7OOD|1|3|C|659
7OOD|1|3|U|660
7OOD|1|3|G|661
7OOD|1|3|U|662
7OOD|1|3|A|663
7OOD|1|3|G|664
*
7OOD|1|3|C|671
7OOD|1|3|G|672
7OOD|1|3|A|673
7OOD|1|3|G|674
*
7OOD|1|3|C|686
7OOD|1|3|G|687
7OOD|1|3|U|688
7OOD|1|3|U|689
7OOD|1|3|U|690
7OOD|1|3|G|691

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L35

Chain c

50S ribosomal protein L4

Chain k

50S ribosomal protein L15