J4_7OSA_001
3D structure
- PDB id
- 7OSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAUUAAAUC*GCC*GUAAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 7OSA|1|18S|A|359
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7OSA_001 not in the Motif Atlas
- Homologous match to J4_8C3A_021
- Geometric discrepancy: 0.0704
- The information below is about J4_8C3A_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_78231.1
- Basepair signature
- cWW-cSH-tHS-cWW-F-F-tHW-F-cWW-F-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7OSA|1|18S|C|99
7OSA|1|18S|A|100
7OSA|1|18S|U|101
7OSA|1|18S|U|102
7OSA|1|18S|A|103
7OSA|1|18S|A|104
7OSA|1|18S|A|105
7OSA|1|18S|U|106
7OSA|1|18S|C|107
*
7OSA|1|18S|G|307
7OSA|1|18S|C|308
7OSA|1|18S|C|309
*
7OSA|1|18S|G|357
7OSA|1|18S|U|358
7OSA|1|18S|A|359
7OSA|1|18S|A|360
7OSA|1|18S|C|361
*
7OSA|1|18S|G|383
7OSA|1|18S|G|384
Current chains
- Chain 18S
- 18S rRNA
Nearby chains
- Chain eS4
- 40S ribosomal protein S4
- Chain eS8
- 40S ribosomal protein S8
- Chain uS12
- 40S ribosomal protein S23
- Chain uS17
- 40S ribosomal protein S11-B
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