J4_7OSM_009

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAAG*UUGAUU*AACC*GUG

Length

18 nucleotides

Bulged bases

7OSM|1|25S|A|2657

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OSM|1|25S|C|2654
7OSM|1|25S|U|2655
7OSM|1|25S|A|2656
7OSM|1|25S|A|2657
7OSM|1|25S|G|2658
*
7OSM|1|25S|U|2712
7OSM|1|25S|U|2713
7OSM|1|25S|G|2714
7OSM|1|25S|A|2715
7OSM|1|25S|U|2716
7OSM|1|25S|U|2717
*
7OSM|1|25S|A|2739
7OSM|1|25S|A|2740
7OSM|1|25S|C|2741
7OSM|1|25S|C|2742
*
7OSM|1|25S|G|2751
7OSM|1|25S|U|2752
7OSM|1|25S|G|2753

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL21

BJ4_G0003770.mRNA.1.CDS.1

Chain eL29

60S ribosomal protein L29

Chain eL42

BJ4_G0001880.mRNA.1.CDS.1

Chain uL18

60S ribosomal protein L5