J4_7OW7_003

3D structure

PDB id

7OW7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EIF6-bound large subunit of the human ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CUC*GCC*GCGC*GGAGCG

Length

16 nucleotides

Bulged bases

7OW7|1|A|G|1271, 7OW7|1|A|C|1272

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7OW7|1|A|C|981
7OW7|1|A|U|982
7OW7|1|A|C|983
*
7OW7|1|A|G|1070
7OW7|1|A|C|1071
7OW7|1|A|C|1072
*
7OW7|1|A|G|1240
7OW7|1|A|C|1241
7OW7|1|A|G|1242
7OW7|1|A|C|1243
*
7OW7|1|A|G|1268
7OW7|1|A|G|1269
7OW7|1|A|A|1270
7OW7|1|A|G|1271
7OW7|1|A|C|1272
7OW7|1|A|G|1273

Current chains

Chain A

28S rRNA

Nearby chains

Chain H

60S ribosomal protein L6

Chain V

60S ribosomal protein L29

Chain m

60S ribosomal protein L7