J4_7P7R_004
3D structure
- PDB id
- 7P7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAG*CC*GAGC*GG
- Length
- 14 nucleotides
- Bulged bases
- 7P7R|1|A|G|1307, 7P7R|1|A|A|1308, 7P7R|1|A|G|1689
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7P7R_004 not in the Motif Atlas
- Homologous match to J4_4WF9_004
- Geometric discrepancy: 0.1126
- The information below is about J4_4WF9_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_64571.6
- Basepair signature
- cWW-F-cWW-tSS-cWW-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
7P7R|1|A|C|1306
7P7R|1|A|G|1307
7P7R|1|A|A|1308
7P7R|1|A|A|1309
7P7R|1|A|A|1310
7P7R|1|A|G|1311
*
7P7R|1|A|C|1329
7P7R|1|A|C|1330
*
7P7R|1|A|G|1687
7P7R|1|A|A|1688
7P7R|1|A|G|1689
7P7R|1|A|C|1690
*
7P7R|1|A|G|2022
7P7R|1|A|G|2023
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32-3
- Chain Q
- 50S ribosomal protein L17
- Chain V
- 50S ribosomal protein L22
Coloring options: