J4_7PIB_018

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GAGUAACAC*GCC*GUAG*CC

Length

18 nucleotides

Bulged bases

7PIB|1|5|C|106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIB|1|5|G|100
7PIB|1|5|A|101
7PIB|1|5|G|102
7PIB|1|5|U|103
7PIB|1|5|A|104
7PIB|1|5|A|105
7PIB|1|5|C|106
7PIB|1|5|A|107
7PIB|1|5|C|108
*
7PIB|1|5|G|234
7PIB|1|5|C|235
7PIB|1|5|C|236
*
7PIB|1|5|G|282
7PIB|1|5|U|283
7PIB|1|5|A|284
7PIB|1|5|G|285
*
7PIB|1|5|C|307
7PIB|1|5|C|308

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain K

30S ribosomal protein S12

Chain O

30S ribosomal protein S16

Chain P

30S ribosomal protein S17