J4_7PIR_006

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

GGACUG*CACAA*UGAC*GUAACC

Length

21 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|3|G|1778
7PIR|1|3|G|1779
7PIR|1|3|A|1780
7PIR|1|3|C|1781
7PIR|1|3|U|1782
7PIR|1|3|G|1783
*
7PIR|1|3|C|1795
7PIR|1|3|A|1796
7PIR|1|3|C|1797
7PIR|1|3|A|1798
7PIR|1|3|A|1799
*
7PIR|1|3|U|1834
7PIR|1|3|G|1835
7PIR|1|3|A|1836
7PIR|1|3|C|1837
*
7PIR|1|3|G|1982
7PIR|1|3|U|1983
7PIR|1|3|A|1984
7PIR|1|3|A|1985
7PIR|1|3|C|1986
7PIR|1|3|C|1987

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L2