J4_7PIR_008

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

CAAAGG*CUUGAC*GGU*AGG

Length

18 nucleotides

Bulged bases

7PIR|1|3|A|2294

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|3|C|2293
7PIR|1|3|A|2294
7PIR|1|3|A|2295
7PIR|1|3|A|2296
7PIR|1|3|G|2297
7PIR|1|3|G|2298
*
7PIR|1|3|C|2350
7PIR|1|3|U|2351
7PIR|1|3|U|2352
7PIR|1|3|G|2353
7PIR|1|3|A|2354
7PIR|1|3|C|2355
*
7PIR|1|3|G|2378
7PIR|1|3|G|2379
7PIR|1|3|U|2380
*
7PIR|1|3|A|2389
7PIR|1|3|G|2390
7PIR|1|3|G|2391

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L35

Chain n

50S ribosomal protein L18

Chain u

50S ribosomal protein L27

Chain z

50S ribosomal protein L33 1