J4_7PIR_011

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

AAUG*CAUAAGAA*UUGAAAG*CGUU

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|5|A|127
7PIR|1|5|A|128
7PIR|1|5|U|129
7PIR|1|5|G|130
*
7PIR|1|5|C|164
7PIR|1|5|A|165
7PIR|1|5|U|166
7PIR|1|5|A|167
7PIR|1|5|A|168
7PIR|1|5|G|169
7PIR|1|5|A|170
7PIR|1|5|A|171
*
7PIR|1|5|U|194
7PIR|1|5|U|195
7PIR|1|5|G|196
7PIR|1|5|A|197
7PIR|1|5|A|198
7PIR|1|5|A|199
7PIR|1|5|G|200
*
7PIR|1|5|C|215
7PIR|1|5|G|216
7PIR|1|5|U|217
7PIR|1|5|U|218

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S20