J4_7PIR_017

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

GGUUUUCCACC*GA*UCGAG*CGAAGGUGGUAUUAAUC

Length

35 nucleotides

Bulged bases

7PIR|1|3|A|1585

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|3|G|1463
7PIR|1|3|G|1464
7PIR|1|3|U|1465
7PIR|1|3|U|1466
7PIR|1|3|U|1467
7PIR|1|3|U|1468
7PIR|1|3|C|1469
7PIR|1|3|C|1470
7PIR|1|3|A|1471
7PIR|1|3|C|1472
7PIR|1|3|C|1473
*
7PIR|1|3|G|1492
7PIR|1|3|A|1493
*
7PIR|1|3|U|1551
7PIR|1|3|C|1552
7PIR|1|3|G|1553
7PIR|1|3|A|1554
7PIR|1|3|G|1555
*
7PIR|1|3|C|1575
7PIR|1|3|G|1576
7PIR|1|3|A|1577
7PIR|1|3|A|1578
7PIR|1|3|G|1579
7PIR|1|3|G|1580
7PIR|1|3|U|1581
7PIR|1|3|G|1582
7PIR|1|3|G|1583
7PIR|1|3|U|1584
7PIR|1|3|A|1585
7PIR|1|3|U|1586
7PIR|1|3|U|1587
7PIR|1|3|A|1588
7PIR|1|3|A|1589
7PIR|1|3|U|1590
7PIR|1|3|C|1591

Current chains

Chain 3

23S ribosomal RNA

Nearby chains