J4_7PJZ_012

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GAGGG*CGCAUAACG*CCAAAGA*UUGC

Length

25 nucleotides

Bulged bases

7PJZ|1|a|C|183, 7PJZ|1|a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PJZ|1|a|G|142
7PJZ|1|a|A|143
7PJZ|1|a|G|144
7PJZ|1|a|G|145
7PJZ|1|a|G|146
*
7PJZ|1|a|C|176
7PJZ|1|a|G|177
7PJZ|1|a|C|178
7PJZ|1|a|A|179
7PJZ|1|a|U|180
7PJZ|1|a|A|181
7PJZ|1|a|A|182
7PJZ|1|a|C|183
7PJZ|1|a|G|184
*
7PJZ|1|a|C|193
7PJZ|1|a|C|194
7PJZ|1|a|A|195
7PJZ|1|a|A|196
7PJZ|1|a|A|197
7PJZ|1|a|G|198
7PJZ|1|a|A|199
*
7PJZ|1|a|U|218
7PJZ|1|a|U|219
7PJZ|1|a|G|220
7PJZ|1|a|C|221

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20