J4_7PWO_001

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CC*GAGUAG*CGAAG*CAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|109
7PWO|1|1|C|110
*
7PWO|1|1|G|220
7PWO|1|1|A|221
7PWO|1|1|G|222
7PWO|1|1|U|223
7PWO|1|1|A|224
7PWO|1|1|G|225
*
7PWO|1|1|C|246
7PWO|1|1|G|247
7PWO|1|1|A|248
7PWO|1|1|A|249
7PWO|1|1|G|250
*
7PWO|1|1|C|267
7PWO|1|1|A|268
7PWO|1|1|A|269
7PWO|1|1|G|270

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain L2

60S ribosomal protein L13

Chain N2

Ribosomal protein L15

Chain h2

Ribosomal protein L35

Chain i2

Ribosomal protein L36-1