J4_7PWO_002

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CGCGAGG*CGCC*GAG*CGUACG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|150
7PWO|1|1|G|151
7PWO|1|1|C|152
7PWO|1|1|G|153
7PWO|1|1|A|154
7PWO|1|1|G|155
7PWO|1|1|G|156
*
7PWO|1|1|C|171
7PWO|1|1|G|172
7PWO|1|1|C|173
7PWO|1|1|C|174
*
7PWO|1|1|G|178
7PWO|1|1|A|179
7PWO|1|1|G|180
*
7PWO|1|1|C|192
7PWO|1|1|G|193
7PWO|1|1|U|194
7PWO|1|1|A|195
7PWO|1|1|C|196
7PWO|1|1|G|197

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain 42

rRNA 5.8S

Chain C2

Ribosomal protein L4

Chain Y2

Ribosomal protein L26