J4_7PWO_005
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 7PWO|1|1|U|1801
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7PWO_005 not in the Motif Atlas
- Homologous match to J4_8C3A_007
- Geometric discrepancy: 0.1098
- The information below is about J4_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7PWO|1|1|C|1679
7PWO|1|1|U|1680
7PWO|1|1|G|1681
*
7PWO|1|1|C|1735
7PWO|1|1|G|1736
*
7PWO|1|1|C|1754
7PWO|1|1|U|1755
7PWO|1|1|U|1756
7PWO|1|1|A|1757
7PWO|1|1|A|1758
7PWO|1|1|G|1759
7PWO|1|1|G|1760
7PWO|1|1|U|1761
7PWO|1|1|A|1762
7PWO|1|1|G|1763
*
7PWO|1|1|U|1797
7PWO|1|1|G|1798
7PWO|1|1|A|1799
7PWO|1|1|A|1800
7PWO|1|1|U|1801
7PWO|1|1|G|1802
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A2
- Ribosomal protein L2
- Chain n1
- Ribosomal protein eL41
Coloring options: