J4_7PWO_006

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCACG*CCG*CC*GGG

Length

13 nucleotides

Bulged bases

7PWO|1|1|C|2080

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|C|2077
7PWO|1|1|C|2078
7PWO|1|1|A|2079
7PWO|1|1|C|2080
7PWO|1|1|G|2081
*
7PWO|1|1|C|2135
7PWO|1|1|C|2136
7PWO|1|1|G|2137
*
7PWO|1|1|C|2164
7PWO|1|1|C|2165
*
7PWO|1|1|G|2174
7PWO|1|1|G|2175
7PWO|1|1|G|2176

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain T2

Ribosomal protein L21

Chain o2

Ribosomal protein L44