J4_7PWO_008

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GCAC*GC*GGG*CCCC

Length

13 nucleotides

Bulged bases

7PWO|1|1|G|2514

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PWO|1|1|G|2426
7PWO|1|1|C|2427
7PWO|1|1|A|2428
7PWO|1|1|C|2429
*
7PWO|1|1|G|2459
7PWO|1|1|C|2460
*
7PWO|1|1|G|2513
7PWO|1|1|G|2514
7PWO|1|1|G|2515
*
7PWO|1|1|C|2549
7PWO|1|1|C|2550
7PWO|1|1|C|2551
7PWO|1|1|C|2552

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain B2

Ribosomal protein L3

Chain O2

Ribosomal protein L13a

Chain V2

Ribosomal protein L23