J4_7Q08_010
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- CAUUAAAUC*GCC*GUAAC*GG
- Length
- 19 nucleotides
- Bulged bases
- 7Q08|1|A|A|357
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_7Q08_010 not in the Motif Atlas
- Homologous match to J4_8C3A_021
- Geometric discrepancy: 0.0919
- The information below is about J4_8C3A_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_78231.1
- Basepair signature
- cWW-cSH-tHS-cWW-F-F-tHW-F-cWW-F-F-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
7Q08|1|A|C|99
7Q08|1|A|A|100
7Q08|1|A|U|101
7Q08|1|A|U|102
7Q08|1|A|A|103
7Q08|1|A|A|104
7Q08|1|A|A|105
7Q08|1|A|U|106
7Q08|1|A|C|107
*
7Q08|1|A|G|305
7Q08|1|A|C|306
7Q08|1|A|C|307
*
7Q08|1|A|G|355
7Q08|1|A|U|356
7Q08|1|A|A|357
7Q08|1|A|A|358
7Q08|1|A|C|359
*
7Q08|1|A|G|381
7Q08|1|A|G|382
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain J
- 40S ribosomal protein S8
- Chain M
- Ribosomal 40S subunit protein S11A
- Chain Y
- Ribosomal 40S subunit protein S23B
Coloring options: